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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015797121.1_cds_XP_016453560.1_4726
CDS Infomation

[gene=LOC107777897] [db_xref=GeneID:107777897] [protein=alpha-ketoglutarate-dependent dioxygenase alkB-like] [protein_id=XP_016453560.1] [location=join(28400..28494,28620..29598)] [gbkey=CDS]
Sequence

ATGTACGGTTCCAACCCTAGCACCAACGATGAAGAGCGAACCGCTTTCAGGAAGGCTGAA
AAGAAATACAAGCTGTATTATGACAATACCCGAAAGAAAAAGCAACCAAGACCAGTGGAT
TTGTCGGAGGTAATTGATTTTAAGTCAATTTCAGAGTCTTACCGTCGAAATGGTGAACTT
CCTTCAGGCATTTTCGCAATTCAATGCGATTTTGATAGTCTTGTCTTCTGCTTGGAGAGT
CATCCAGGGTTTTATTTCATTCCTGGAGCATTAACTGTTGAGGAGCAGTGCCGTTGGATT
AAGGAGAGTTTAGCAAGTTTTCCTCAACCTCCAAACAGGACCAACCATAATGCAATTTAT
GGTCCTCTACAGGACTTATTTGCTGCTGCCAAGGATAATAAAGCTTTGATTCAAGAAGAT
AAGCACTGTGTGACCAATAATTCTGAGGTGGAAATTATCCAAAACGACATAAGTGTTCCG
AAATGGAATTTTTTTGATCAATCAGGTGCATTATCTAGAGAAATTACATGCAAATCAGTG
CCAGCCTCTGTTTTGCTTCGTAAGTTAAGGTGGAGCACCCTTGGCTTGCAGTTTGACTGG
TCGAAACGGAACTATAATATTTCTCTGCCTCACAACAAGATACCTGATGCACTTTGCCTG
CTGGCTGAAAGAATGGCAGCAGCTGCCCTGCCATCGGGTGAAGTGTTTCAGGCTGAAGCA
GCAATTGTTAATTACTTTGGGCTAGGTGACACACTTGGTGGCCACGTTGATGACATGGAG
AAGGATTGGAGTAAACCTATTGTTAGCATGAGTTTGGGCTGTAAAGGTATTTTCCTTATC
GGGGGAAAGTCTAGGGACATTCCGCCTGTTGCAATGTTTGTTCGAAGTGGTGATGTTATT
CTTATGGCAGGACAAGCTAGGGAATGCTTCCATGGTGTCCCTAGGATCTTCACTGATAAA
GAACACGCCGATATATCCTCCCTTGAATTGCAGTTTTCTGATGAAGATGACTCTGCTTTC
TTGGAGTACATTAGGACTTCTAGAATCAATATCAACATTAGACAAGTATTCTAG

Peptide Sequence

PEP ID

XP_016453560.1
PEP Infomation

PREDICTED: alpha-ketoglutarate-dependent dioxygenase alkB-like [Nicotiana tabacum]
Sequence

MYGSNPSTNDEERTAFRKAEKKYKLYYDNTRKKKQPRPVDLSEVIDFKSISESYRRNGEL
PSGIFAIQCDFDSLVFCLESHPGFYFIPGALTVEEQCRWIKESLASFPQPPNRTNHNAIY
GPLQDLFAAAKDNKALIQEDKHCVTNNSEVEIIQNDISVPKWNFFDQSGALSREITCKSV
PASVLLRKLRWSTLGLQFDWSKRNYNISLPHNKIPDALCLLAERMAAAALPSGEVFQAEA
AIVNYFGLGDTLGGHVDDMEKDWSKPIVSMSLGCKGIFLIGGKSRDIPPVAMFVRSGDVI
LMAGQARECFHGVPRIFTDKEHADISSLELQFSDEDDSAFLEYIRTSRININIRQVF

Transcript Sequence

Gene sequence data has not been registered.